[CWB] Installing from svn on ubuntu 11.10

Fri Nov 4 13:08:04 CET 2011

My cheks after trying once more.

Here are some things you can try checking:
Are you using Apache?
Yes

When you went to the adm directory, did it ask you
to log on?
No

Is there a .htaccess file in the adm directory?
Yes

Are there .htpasswd and .htgroup files in the location you specified during setup?
Yes

Does the htpasswd file contain the username of the superuser?
Yes
sysadmin:$apr1$h/SbUVoK$cL720/tTMwjjf9jS9gWgp.

and htgroup > superusers:
sysadmin

Does the config.inc.php file contain a variable $superuser_username 
that has your usename in it?
Yes:
$superuser_username = 'sysadmin';

_______________________
            andrés
chandía

P No imprima
innecesariamente. ¡Cuide el medio ambiente!

On Fri, October 28, 2011
11:10 am, Hardie, Andrew wrote:
 <style type="text/css">-></style>

Hi
Andrés,

The
error you&rsquo;re getting indicates that you are not logged on as the administrative
user.

It
doesn&rsquo;t have anything to do with &ldquo;GRANT FILE ON *.*&rdquo;. The latter is a MySQL
permission
that
you will need to grant to the mysql username that CQPweb uses to connect to the
mysqld
server. For example, if the mysql username is cqpweb_mysql, then you need to
run
the following command when connected to the mysql server as root:

GRANT
FILE ON *.* TO 'cqpweb_mysql';
or
possibly, depending on your setup,
GRANT
FILE ON *.* TO 'cqpweb_mysql'@'localhost';

As
for the actual problem:

Here
are some things you can try checking:

·        
Are
you using Apache? 
·        
When
you went to the adm directory, did it ask you to log on?
·        
Is
there a .htaccess file in the adm directory?
·        
Are
there .htpasswd and .htgroup files in the location you specified during setup?
·        
Does
the htpasswd file contain the username of the superuser?
·        
Does
the config.inc.php file contain a variable $superuser_username 
that has your usename in it?

best

Andrew.

(Sorry
the reply was not immediate, when I have lots of teaching, catching up with list
emails
can
be somewhat delayed.)

From:
cwb-bounces at sslmit.unibo.it [mailto:cwb-bounces at sslmit.unibo.it] On Behalf Of
"Andrés Chandía"
 Sent: 26 October 2011
13:54
 To: dalloliogm at gmail.com
 Cc: Open source
development of the Corpus WorkBench
 Subject: Re: [CWB] Installing from
svn on ubuntu 11.10

I have done something wrong, but I don't
know what. I have followed the tutorial 3 o 4 times, but always the same;
 the only thing
I see as a probable cause of problem is that I really don't understand what you mean with:

 the new user also needs GRANT FILE
ON *.*

 well, this is what I get after doing "php cqpweb-autoconfig.php"
at the web if I go to 

 http://your-server.net/path/to/cqpweb/web/directory/adm
CQPweb encountered an error and could not continue.
You do not have permission to use this program.
... in file
/mnt/vmdata/vParles/web/llocs/cqp/lib/adminhome.inc.php line
53.

            CQPweb v3.0.3 © 2008-2011 

            Corpus and tagset help

            You are not logged in

_______________________
             andrés chandía

 P No
imprima innecesariamente. ¡Cuide el medio ambiente!

 On Wed, October
26, 2011 12:58 pm, Giovanni Marco Dall'Olio wrote:

2011/10/26 "AndrÃ©s ChandÃa"
andres at chandia.net>
Perfect, I did it this way:

 :~/$ sudo rm -rf
cwb-perl/CWB-CQI
 :~/$ sudo svn co 
https://cwb.svn.sourceforge.net/svnroot/cwb/perl/trunk cwb-perl

 Don't call svn as a super user, it's
dangerous and you don't need it.

 You can just do:

 :~/$ sudo rm -rf
cwb-perl/CWB-CQI
 :~/$ svn co 
https://cwb.svn.sourceforge.net/svnroot/cwb/perl/trunk cwb-perl
 :~$ cd
cwb-perl/CWB-CQI/
 :~/cwb-perl/CWB-CQI$ sudo perl Makefile.PLÂ  --config
/usr/local/cwb-3.4.0/bin/cwb-config

 Â 

Checking if your kit is complete...
 Looks good

 Writing Makefile for CWB::CQI

 :~/cwb-perl/CWB-CQI$
sudo make
 cp lib/CWB/CQI.pm blib/lib/CWB/CQI.pm
 cp lib/CWB/CQI/Server.pm
blib/lib/CWB/CQI/Server.pm
 cp lib/CWB/CQI/IOClient.pm blib/lib/CWB/CQI/IOClient.pm

cp lib/CWB/CQI/Client.pm blib/lib/CWB/CQI/Client.pm
 Manifying
blib/man3/CWB::CQI::IOClient.3pm
 Manifying blib/man3/CWB::CQI::Server.3pm

Manifying blib/man3/CWB::CQI::Client.3pm

 :~/cwb-perl/CWB-CQI$ sudo make test 

 PERL_DL_NONLAZY=1 /usr/bin/perl
"-MExtUtils::Command::MM" "-e" "test_harness(0, 'blib/lib',
'blib/arch')" t/*.t
 t/00_load.t ........... okÂ Â  

t/01_load_ioclient.t .. okÂ Â  

t/10_vss.t ............ 1/31 # CQP query: "small"%c
(","? [pos="JJ.*"])* [pos="NN.*"]
 t/10_vss.t ............
okÂ Â Â Â  
 t/11_vss_ioclient.t ... okÂ Â Â
Â  
 All tests successful.
 Files=4, Tests=66,Â  1 wallclock secs ( 0.04
usrÂ  0.00 sys +Â  0.24 cusrÂ  0.04 csys =Â  0.32 CPU)
 Result:
PASS

 :~/cwb-perl/CWB-CQI$ sudo make install
 Installing
/usr/local/share/perl/5.12.4/CWB/CQI/Server.pm
 Installing
/usr/local/man/man3/CWB::CQI::Server.3pm
 Installing
/usr/local/man/man3/CWB::CQI::IOClient.3pm
 Installing
/usr/local/man/man3/CWB::CQI::Client.3pm
 Appending installation info to
/usr/local/lib/perl/5.12.4/perllocal.pod 

_______________________
 Â Â Â Â Â Â Â Â
Â Â Â Â andrÃ©s chandÃa

 P No imprima innecesariamente. Â¡Cuide el
medio ambiente!

On Tue, October 25, 2011 7:21 pm, Stefan
Evert wrote:
 -> 
 ->> Now, at the CWB-CQI installation in make test i got
some error but make install went well,
 ->> is this something to worry about?

-> 
 -> Only if you want to use the CQi interface ...
 -> 
 ->
That's actually a buglet in the CWB::CQI::Server module, which expects the cqpserver binary
to
 -> be in the standard search path (so it can be invoked with system
"cqpserver ..." from Perl). 
 -> This should really be pulled from the
configuration information in the CWB module, but that
 -> hasn't been implemented yet
because CWB-CQI doesn't depend on the basic CWB/Perl package.
 -> 
 -> If you
need CWB-CQI to work, there are two possible workarounds:
 -> 
 -> 1) Add
/usr/local/cwb-3.4.0/bin to your path
 -> 
 -> 2) Check out the latest SVN
copy, where I've fixed the bug (not tested thoroughly, so I'd be
 -> interested to
hear if this fixes the problem for you)
 -> 
 -> Cheers,
 -> Stefan
 -> 
 -> _______________________________________________
 -> CWB mailing
list
 ->  CWB at sslmit.unibo.it
 -> 
http://devel.sslmit.unibo.it/mailman/listinfo/cwb
 ->

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 -- 

Giovanni Dall'Olio, phd student
 Department of Biologia Evolutiva at CEXS-UPF (Barcelona,
Spain)

 My blog on bioinformatics:  http://bioinfoblog.it

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